BioYODIE Named Entity Disambiguation

This version of Bio-YODIE includes terms from the following UMLS vocabularies:

• AI/RHEUM
• Alcohol and Other Drug Thesaurus
• Alternative Billing Concepts
• Anatomical Therapeutic Chemical Classification System
• Authorized Osteopathic Thesaurus
• Beth Israel Problem List
• BioCarta online maps of molecular pathways, adapted for NCI use
• Biomedical Research Integrated Domain Group Model
• Cancer Research Center of Hawaii Nutrition Terminology
• Cancer Therapy Evaluation Program - Simple Disease Classification
• CDISC Glossary Terminology
• Clinical Care Classification
• Clinical Classifications Software
• Clinical Classifications Software 10
• Clinical Concepts by R A Miller
• Clinical Data Interchange Standards Consortium
• Clinical Problem Statements
• Clinical Trials Reporting Program
• Common Terminology Criteria for Adverse Events
• Common Terminology Criteria for Adverse Events 3.0
• Common Terminology Criteria for Adverse Events 5.0
• Congenital Mental Retardation Syndromes
• Consumer Health Vocabulary
• Content Archive Resource Exchange Lexicon
• COSTAR
• COSTART
• CPT in HCPCS
• CRISP Thesaurus
• Current Dental Terminology
• Current Dental Terminology in HCPCS
• Current Procedural Terminology
• Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition
• Digital Anatomist
• Digital Imaging Communications in Medicine
• Diseases Database
• DrugBank
• DXplain
• FDA Structured Product Labels
• FDB MedKnowledge
• Foundational Model of Anatomy
• Gene Ontology
• Geopolitical Entities, Names, and Codes (GENC) Standard Edition 1
• lobal Alignment of Immunization Safety Assessment in pregnancy
• Glossary of Clinical Epidemiologic Terms
• Gold Standard Drug Database
• HCPCS Hierarchical Terms (UMLS)
• Healthcare Common Procedure Coding System
• HL7 Version 2.5
• HL7 Version 3.0
• HUGO Gene Nomenclature Committee
• Human Phenotype Ontology
• ICD-10 Procedure Coding System
• ICD-10, American English Equivalents
• ICD-10, Australian Modification
• ICD-10, Australian Modification, Americanized English Equivalents
• ICD-9-CM Entry Terms
• ICPC-2 PLUS
• ICPC2-ICD10 Thesaurus
• ICPC2E American English Equivalents
• ICPC2E-ICD10 Thesaurus, American English Equivalents
• International Classification for Nursing Practice
• International Classification of Diseases and Related Health Problems, Tenth Revision
• International Classification of Diseases, Ninth Revision, Clinical Modification
• International Classification of Diseases, Tenth Revision, Clinical Modification
• International Classification of Functioning, Disability and Health
• International Classification of Functioning, Disability and Health for Children and Youth
• International Classification of Primary Care
• International Classification of Primary Care, 2nd Edition, Electronic
• International Conference on Harmonization
• Jackson Laboratories Mouse Terminology, adapted for NCI use
• KEGG Pathway Database
• Library of Congress Subject Headings
• Library of Congress Subject Headings, Northwestern University subset
• LOINC
• Manufacturers of Vaccines
• MEDCIN
• MedDRA
• Medical Entities Dictionary
• Medication Reference Terminology
• MedlinePlus Health Topics
• MeSH
• Metathesaurus CMS Formulary Reference File
• Metathesaurus Names
• Micromedex
• Minimal Standard Terminology (UMLS)
• Multum
• NANDA-I Taxonomy
• National Cancer Institute Nature Pathway Interaction Database
• National Council for Prescription Drug Programs
• National Drug File
• National Drug File - FDASPL
• National Drug File - FMTSME
• National Drug File - Reference Terminology
• National Institute of Child Health and Human Development
• National Uniform Claim Committee - Health Care Provider Taxonomy
• NCBI
• NCI Developmental Therapeutics Program
• NCI Dictionary of Cancer Terms
• NCI Division of Cancer Prevention Program
• NCI Health Level 7
• NCI HUGO Gene Nomenclature
• NCI SEER ICD Mappings
• NCI Thesaurus
• Neuronames Brain Hierarchy
• Nursing Interventions Classification
• Nursing Outcomes Classification
• Omaha System
• Online Mendelian Inheritance in Man
• Patient Care Data Set
• Perioperative Nursing Data Set
• Pharmacy Practice Activity Classification
• Physician Data Query
• Prostate Imaging Reporting and Data System
• Psychological Index Terms
• Quick Medical Reference
• Read Codes
• Read Codes Am Engl
• Read Codes Am Synth
• Read Codes Synth
• Registry Nomenclature Information System
• RXNORM
• SNOMED 1982
• SNOMED Intl 1998
• Source of Payment Typology
• Source Terminology Names (UMLS)
• Standard Product Nomenclature
• U.S. Centers for Disease Control and Prevention
• U.S. Food and Drug Administration
• UltraSTAR
• Unified Code for Units of Measure
• Universal Medical Device Nomenclature System
• US Edition of SNOMED CT
• USP Compendial Nomenclature
• USP Model Guidelines
• Vaccines Administered
• Veterinary Extension to SNOMED CT
• WHOART
• Zebrafish Model Organism Database